This article is intended as a reference to assist in the implementation of the various facets of non-destructive plant stress phenotyping.
In the context of global warming, the cultivation of crops capable of withstanding elevated temperatures, or adapting to heat stress, is indispensable. Fundamental to this is the knowledge of heat stress-tolerant genes or genomic regions. In rice, although several quantitative trait loci (QTLs) governing heat tolerance have been mapped, the pursuit of candidate genes from within these loci remains unreported. A meta-analysis of rice microarray data on heat stress offers a more comprehensive genomic resource, enabling a more precise dissection of quantitative trait loci (QTLs) and the identification of key genes associated with heat tolerance. allergen immunotherapy Seven publicly available microarray datasets were employed in this study to develop RiceMetaSys-H, a database that includes 4227 heat stress-responsive genes (HRGs). Nagina 22 (N22) and IR64 microarray datasets, created in-house, were subjected to a heat stress period of 8 days. Searching the database for HRGs involves genotypes, growth stages, tissues, and physical locations within the genome. Locus IDs furnish complete details, such as annotations, fold changes, and the experimental materials. The heightened activity of genes responsible for hormone synthesis, signaling, sugar processing, carbon assimilation, and the reactive oxygen species pathway was identified as the crucial mechanism underlying improved heat resistance. Combining variant and expression analysis, the database allowed for the examination of the notable impact of QTLs on chromosomes 4, 5, and 9 from the IR64/N22 mapping population's genetic makeup. Concerning the 18, 54, and 62 genes in these three QTLs, a subset of 5, 15, and 12 genes, respectively, displayed non-synonymous substitutions. A network analysis of the HRGs found in the QTL regions isolated fifty-seven interacting genes from the selected QTLs. A variant analysis indicated a considerably higher proportion of unique amino acid substitutions (N22/IR64) in QTL-specific genes than in common ones; specifically, the ratio was 2580.88 (293-fold) for QTL-specific genes, whereas network genes exhibited a ratio of 0880.67 (1313-fold). The examination of gene expression in these 89 genes indicated 43 differentially expressed genes (DEGs) when comparing IR64 and N22. The database, expression profiles, and allelic variations, when integrated, pointed towards four potent candidates (LOC Os05g43870, LOC Os09g27830, LOC Os09g27650, and LOC Os09g28000) for enhanced heat stress tolerance. To combat high-temperature stress in rice, breeding programs can leverage the database that has been developed.
In the 2019 growing season, a 12-treatment, three-replication randomized complete block design was used to examine how different irrigation regimes and fertilizer sources affected the eco-physiological responses and yield characteristics of dragon's head. Six fertilizer sources (animal manure, vermicompost, poultry manure, biofertilizer, chemical fertilizer, and a control) were combined with two irrigation methods, namely rainfed and supplemental irrigation, to form the treatments. Data suggest a positive correlation between supplementary irrigation and the application of vermicompost, poultry manure, and animal manure and the growth of dragon's head, reflected by increased nutrient absorption (phosphorus and potassium) and enhanced relative water contents, chlorophyll and carotenoid levels, and fixed oil percentage. The activities of the enzymes catalase, ascorbate peroxidase, and superoxide dismutase decreased in plants cultivated without irrigation; application of organic fertilizer, however, led to an increase in the antioxidant enzyme activity. Plants treated with vermicompost and supplemental irrigation demonstrated the highest grain yield (721 kg ha-1), biological yield (5858 kg ha-1), total flavonoids (147 mg g-1 DW), total phenol (2790 mg g-1 DW), fixed oil yield (20017 kg ha-1), and essential oil yield (118 kg ha-1). Consequently, organic fertilizers, such as vermicompost and poultry manure, are suggested as a replacement for the use of chemical fertilizers. Techniques involving rainfed and supplemental irrigation systems can increase the overall popularity of organically grown crops.
A comparative study of the in vitro and in vivo efficacy of three biocontrol agents, Trichoderma viride, Pseudomonas fluorescence, and Bacillus subtilis, against Rhizoctonia solani (AG-4) was undertaken, contrasting their results with Rizolex-T 50% wettable powder and Amistar 25%. Antifungal enzyme activity in the biocontrol agents' culture filtrate was determined. The tested biocontrol agents' capacity to induce the coriander immune system against R. solani was explored by evaluating the resistance-related enzyme and compound content in biocontrol agent-treated coriander plants, juxtaposed with control plants. The research results indicated a notable suppression of *R. solani*'s linear growth by all the tested biocontrol agents, with *T. viride* achieving the greatest inhibitory rate. The enhanced antimicrobial activity of T. viride, evident in higher levels of cellulase, chitinase, and protease, distinguishes it from P. fluorescence and B. subtilis. The application of proven biocontrol agents demonstrably reduced the incidence of pre- and post-emergence damping-off, and root rot/wilt diseases affecting coriander, as evident in a comparison to untreated control groups. In the tested samples, biocontrol agents resulted in a significantly higher germination percentage and vigor index in coriander compared to the performance of the tested fungicides. A substantial reduction in photosynthetic pigment reduction, instigated by R. solani, was observed to be considerably lessened by the tested biocontrol agents. The study's results also revealed a substantial increase in enzymes/molecules (specifically, phenylalanine, catalase, peroxidase, catalase, superoxide dismutase, phenylalanine ammonia-lyase, phenolics, ascorbic acids, and salicylic acid) contributing to the resistance of coriander against R. solani, both directly and indirectly. Principal component analysis of the recorded data pointed to the crucial role of high oxidative parameter levels (hydrogen peroxide and lipid peroxidation) and phenolic compound inhibition in the decreased resistance of coriander plants to the infection by R. solani. Biocontrol agents, notably Trichoderma, were shown by heatmap analysis to improve resistance against R. solani through the upregulation of salicylic acid, phenolics, and antioxidant enzymes. Ultimately, the data indicates the promising efficacy of biocontrol agents, especially Trichoderma viride, in addressing the R. solani-induced issues in coriander crops, potentially providing a safer and more sustainable approach compared to chemical fungicides.
Many epiphyte roots exhibit velamen radicum, a dead tissue, at their mature stage. find more Not only does it play a part in water and nutrient absorption, but protection against excessive radiation within the forest canopy's upper layer has also been proposed, but this function has yet to be systematically assessed. To probe this assertion, we delved into the root morphology of 18 orchid and arum plant species. Observing temperature changes on and slightly below the velamen surface under infrared radiation, we determined the thermal insulation attributes of the velamen. We explored the functional relationship between velamen morphology and thermal insulation properties. Moreover, the ability of the living root tissue to endure heat was also investigated. A relationship was found between the velamen's thickness and the temperature difference (Tmax) between the upper and lower velamen surfaces, which fluctuated between 6 and 32 degrees Celsius. Meanwhile, the peak surface temperatures were between 37 and 51 degrees Celsius. Tissue viability exhibited a pronounced decline at temperatures above 42 degrees Celsius, and no subsequent recovery was detected after heat exposure. Subsequently, velamen's insulating properties are insufficient, however, the gathered data highlights considerable interspecies variation in heat tolerance. The latter factor might be a critical element in defining the vertical arrangement of epiphytes.
A crucial source of bioactive compounds, including flavonoids, is Mexican oregano (Lippia graveolens). Antioxidant and anti-inflammatory therapeutic properties, although present, are influenced by the specific constituents and their concentration, elements heavily dependent on the methodology applied during extraction. By comparing extraction procedures, this study sought to identify and measure the concentration of flavonoids in oregano (Lippia graveolens). Emerging and conventional extraction methods encompass maceration using methanol and water, alongside ultrasound-assisted extraction (UAE) employing deep eutectic solvents (DES) like choline chloride-ethylene glycol, choline chloride-glycerol, and choline chloride-lactic acid. The use of supercritical carbon dioxide as a solvent was likewise examined. Six unique extract samples were used to determine their overall reducing capacity, flavonoid content, and antioxidant capacity, measured by the ABTS+, DPPH, FRAP, and ORAC methods. Along with other analyses, UPLC-TQS-MS/MS was used to identify and quantify flavonoids. Colorimetric methods demonstrated that UAE-DES achieved the highest extraction yield and antioxidant capacity. In contrast to alternative methods, maceration with methanol demonstrated a higher concentration of compounds, including the significant presence of naringenin and phloridzin. By means of spray drying microencapsulation, this extract's antioxidant capacity was safeguarded. Medical epistemology Research into oregano extracts, rich in flavonoids, is promising thanks to the use of microcapsules.